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Stock, J. M., A. Martin-Barajas, M. Tellez-Duarte, Early rift sedimentation and structure along the NE margin of Baja California, in Patrick L. Abbott and John D. Cooper, eds., Field Conference Guide 1996, Pacific Section A.A.P.G., Guidebook 73, Pacific Section S.E.P.M., Book 80, p. 337-372, 1996.

Stock, J.M., and J. Lee, Do microplates in subduction zones leave a geological record?, Tectonics, v. 13, p. 1472-1487, 1994.

Wilde, M., and J. Stock, Compression directions in southern California (from Santa Barbara to Los Angeles Basin) obtained from borehole breakouts, J. Geophys. Res., v. 102, no. B3, p. 4969-4983, 1997.

Kerkela, S., and J. Stock, Compression directions north of the San Fernando Valley determined from borehole breakouts, Geophys. Res. Lett., v. 23, p. 3365-3368, 1996.

Marks, K. M., and J. M. Stock, Early Tertiary gravity-field reconstructions of the southwest Pacific, Earth Plan. Sci. Lett., v. 152 (1-4), p. 267-274, Nov. 1997. See a brief description of this research at the NOAA Web site.

Martin-Barajas, A., J. M. Stock, P. Layer, B. Hausback, P. Renne, and M. Lopez-Martinez, Arc-rift transition volcanism in the Puertecitos Volcanic Province, northeastern Baja California, Mexico, Geol. Soc. Am. Bulletin, v. 107, no. 4, p. 407-424, 1995.

Melbourne, T., I. Carmichael, C. DeMets, K. Hudnut, O. Sanchez, J. Stock, G. Suarez, and F. Webb, The geodetic signature of the M8.0 Oct. 9, 1995 Jalisco Subduction Earthquake, Geophys. Res. Lett, v. 24, no. 6, pp. 715-718, March 1997.

Martin-Barajas, A., Tellez-Duarte, M., and Stock, J. M., The Puertecitos Formation: Pliocene sedimentation along an accommodation zone in northeastern Baja California, in Markes E. Johnson and Jorge Ledesma-Vazquez, eds., Pliocene Carbonate and Related Faces Flanking the Gulf of California, Baja California, Mexico, Geological Society of America Special Paper 318, p. 1-24, 1997.

Zajac, B., and J. Stock, Using borehole breakouts to constrain the complete stress tensor: Results from the Sijan Deep Drilling Project and offshore Santa Maria Basin, California , Journal of Geophysical Research, v 102, p. 10,083-10,100, May 1997.

Lewis, C. J. and J. M. Stock, Paleomagnetic evidence of localized vertical axis rotation during Neogene extension, Sierra San Fermin, northeastern Baja California, Mexico, J. Geophys. Res.,v. 103, no. B2, p. 2455-2470, 1998.

Lewis, C. J. and J. M. Stock, Late Miocene to Recent transtensional tectonics in the Sierra San Fermin, northeastern Baja California, Mexico, J. Struct. Geol.,v. 20, no. 8, p. 1043-1063, 1998.

Atwater, T. and J. M. Stock, Pacific-North America plate tectonics of the Neogene Southwestern United States: An Update, Int. Geol. Rev.,v. 40, no. 5, p. 375-402, 1998.

Marks, K. M., J. M. Stock, and K. Quinn, Evolution of the Australian-Antarctic discordance since Miocene time , J. Geophys. Res.,v. 104, no. B3, p. 4967-4981, 1999.

Stock, J. M., C. J. Lewis and E. A. Nagy, The tuff of San Felipe: An extensive middle Miocene pyroclastic flow deposit in Baja California, Mexico, Journal of Volcanology and Geothermal Research, v.93 (1-2), p. 53-74, 1999.

Nagy, E. A., Grove, M., and Stock, J. M., Age and stratigraphic relationships of pre- and syn-rift volcanic deposits in the northern Puertecitos Volcanic Province, Baja California, Mexico, Journal of Volcanology and Geothermal Research, v. 93 (1-2), p. 1-30, 1999.

Holt, J. W., E. W. Holt, and J. M. Stock, An age constraint on Gulf of California rifting from the Santa Rosalia Basin, Baja California Sur, Mexico, , Geol. Soc. Am. Bulletin, v. 112, no. 4, p. 540-549, 2000.

Nagy, E. A., and Stock, J. M., Structural controls on the Continent-Ocean Transition in the Northern Gulf of California, Journal of Geophysical Research, v. 105, no. B7, p. 16,251-16,269, July 2000.

Billen, M. I., and Stock, J. M., Morphology and origin of the Osbourn Trough, Journal of Geophysical Research, v. 105, p. 13,481-13,489, 2000.

Heinemann, J., J. Stock, R. Clayton, K. Hafner, S. Cande, C. Raymond, Constraints on the proposed Marie Byrd Land - Bellingshausen plate boundary from seismic reflection data, Journal of Geophysical Research, v. 104, no. B11, p. 25,321-25,330, 1999.

Cande, S. C., J. M. Stock, R. D. Muller, and T. Ishihara, Cenozoic motion between East and West Antarctica, Nature, v. 404, p. 145-150, 2000.

Raymond, C. A., J.M. Stock, and S. C. Cande, Fast Paleogene Motion of the Pacific Hotspots from Revised Plate Circuit Constraints, in M. A. Richards, R. G. Gordon, and R. D. van der Hilst, eds., History and Dynamics of Global Plate Motions, AGU Geophysical Monograph 121, p. 359-375, 2000. correction

Muller, R. D., C. Gaina, A. Tikku, D. Mihut, S. C. Cande, and J.M. Stock, Mesozoic/Cenozoic Tectonic Events Around Australia, in M. A. Richards, R. G. Gordon, and R. D. van der Hilst, eds., History and Dynamics of Global Plate Motions, AGU Geophysical Monograph 121, p. 161-188, 2000.

Stock, J. M., Relation of the Puertecitos Volcanic Province, Baja California, Mexico, to development of the plate boundary in the Gulf of California, in Delgado-Granados, H., Aguirre-Diaz, G., and Stock, J. M., eds., Cenozoic Tectonics and Volcanism of Mexico: Boulder, Colorado, Geological Society of America Special Paper 334, p. 143-156, 2000.

Oskin, M., J. Stock, and A. Martin-Barajas, Rapid localization of Pacific-North America plate boundary motion in the Gulf of California, Geology, v. 29, no. 5, p. 459-462, 2001.

Masterlark, T., C. DeMets, H. F. Wang, O. Sanchez, and J. Stock, Homogeneous vs. heterogeneous subduction zone models: coseismic and postseismic deformation, Geophys. Res. Lett., v. 28, no. 21, p. 4047-4050, Nov. 1, 2001.

Hutton, W., C. DeMets, O. Sanchez, G. Suarez, and J. Stock, Slip kinematics and dynamics during and after the 1995 October 9 Mw=8.0 Colima-Jalisco earthquake, Mexico, from GPS geodetic constraints, Geophys. J. Int., v. 146, p. 637-658, 2001.

Larson, R. L., R. A. Pockalny, R. F. Viso, E. Erba, L. J. Abrams, B. P. Luyendyk, J. M. Stock, and R. W. Clayton, Mid-Cretaceous tectonic evolution of the Tongareva triple junction in the southwestern Pacific basin, Geology, v. 30, no. 1, p. 67-70, 2002.

Marks, K. M., and J. M. Stock, Evolution of the Malvinas Plate south of Africa, Marine Geophysical Researches, v. 22, 289-302, 2001.

Melbourne, T., F. Webb., J. Stock, and C. Reigber, Rapid postseismic transients in subduction zones from continuous GPS, J. Geophys. Res., v. 107, no. B10, 2241, doi:10.1029/2001JB000555, 2002.

Stock, J. M., and S. C. Cande, Tectonic History of Antarctic Seafloor in the Australia-New Zealand-South Pacific Sector: Implications for Antarctic Continental Tectonics, "Antarctica at the close of a Millenium", edited by J. A. Gamble, D.N. B. Skinner, and S. Henrys, Royal Society of New Zealand Bulletin 35, p. 251-259, 2002.

Oskin, M., and J. Stock, Marine incursion synchronous with plate boundary localization in the Gulf of California, Geology, v. 31, no 1, p. 23-26, 2003.

Oskin, M., and J. Stock, Miocene to Recent Pacific-North America plate motion and opening of the Upper Delfin Basin, northern Gulf of California, Mexico, Geological Society of America Bulletin, v. 115, no. 10, pp. 1173-1190, 2003.

Persaud, P., J. M. Stock, M. S. Steckler, A. Martin-Barajas, J. B. Diebold, A. Gonzalez-Fernandez, G. S. Mountain, Active deformation and shallow structure of the Wagner, Consag, and Delfin Basins, northern Gulf of California, Mexico, J. Geophys. Res., vol. 108, No. B7, 2355, doi:10.1029/2002JB001937, 31 July 2003.

Stock, J. M., Hotspots come unstuck, Science, v 301 (no 5636), 1059-1060, Aug 22, 2003.

McQuarrie, N., J. M. Stock, C. Verdel, and B. P. Wernicke, Cenozoic evolution of Neotethys and implications for the causes of plate motions, Geophys. Res. Lett., v. 30, no. 20, p. 2036, doi:10.1029/2003GL017992, 2003.

S. C. Cande and J. M. Stock, Pacific-Antarctic- Australia motion and the fo rmation of the Macquarie plate, Geophys. J. Int., v. 157, p. 399-414, 2004.

Oskin, M., and J. Stock, Cenozoic stratigraphy and tectonics of the continental margins of the Upper Delfin Basin, northeastern Baja California and western Sonora, Mexico, in S. Johnson, S. Paterson, et al., eds., Tectonic Evolution of Northwestern Mexico and the Southwestern USA, GSA Special Paper 374, p. 421-438, 2004.

Cande, S. C. and J. M. Stock, Cenozoic reconstructions of the Australia-New Zealand-South Pacific Sector of Antarctica, in "The Cenozoic Southern Ocean: Tectonics, Sedimentation and Climate Change Between Australia and Antarctica ", edited by Neville F. Exon, James P. Kennett, and Mitchel J. Malone, AGU Monograph Series v. 151, p. 5-18, 2004.

Hook, S. J., J. E. Dmochowski, K. A. Howard, L. C. Rowan, K. E. Karlstrom, and J. M. Stock, Mapping variations in weight percent silica from multispectral thermal infrared imagery - Examples from the Hiller Mountains, Nevada, USA and Tres Virgenes-La Reforma, Baja California Sur, Mexico, Remote Sensing of Environment, v. 95, issue, 3, 15 April 2005, p. 273-289, 2005.

Muller, R. D., S. C. Cande, J. M. Stock, and W. R. Keller (2005), Crustal structure and rift flank uplift of the Adare Trough, Antarctica, Geochem. Geophys. Geosyst., 6, Q11010, doi: 10.1029/2005GC001027.

Stock,  J. M.  The Hawaiian-Emperor bend: older than expected, Science v. 301, 5636, 1059-1060, 2006.

Downey, N. J., J. M. Stock, R. W. Clayton, and S. C. Cande (2007), History of the Cretaceous Osbourne Spreading Center, Journal of Geophysical Research, v. 112, B04102, doi:10.1029/2006JB004550.

Davey, F. J., S. C. Cande, and J. M. Stock, Extension in the western Ross Sea region - links between Adare Basin and Victoria Land Basin, Geophysical Research Letters,v. 33, no 20., L20315, 28 Oct. 2006.

Schmitt, S. V., C. DeMets, J. Stock, O. Sanchez, B. Marquez-Azua and G. Reyes, A geodetic study of the 2003 January 22 Tecoman, Colima, Mexico earthquake, Geophys. J. Intl., v. 169, p. 389-406, 2007.

Ai, H-A., J. M. Stock, R. Clayton, and B. Luyendyk, Vertical Tectonics of the High Plateau region, Manihiki Plateau, Western Pacific, from seismic stratigraphy, Mar. Geophys. Res., v. 29, p. 13-26, DPI 10.1007/s11011-008-9042-0, 2008.

Croon, M. M., S. C. Cande, and J. M. Stock, Revised Pacific-Antarctic plate motions and geophysics of the Menard Fracture zone, Geochem. Geophys. Geosyst.,v. 9, no. 7, Q07001, doi:10.1029/2008GC002019, 2008.

Vidal-Solano, J. R., H. Lapierre, J. M. Stock, A. Demant, F. A. Paz Moreno, D. Bosch, P. Brunet and A. Amortegui, Isotope geochemistry and petrogenesis of peralkaline Middle Miocene ignimbrites from central Sonora: relationship with continental break-up and the birth of the Gulf of California, Bull. Soc. geol. Fr., v. 179, no. 5, p. 453-461, 2008.

Molnar, P., and J. Stock, A slowing of India's convergence with Eurasia at ~10 Ma and its implications for Tibetan mantle dynamics, Tectonics,28, TC3001, doi 10.1029/2008TC002271, 2009.

Molnar, P., and J. M. Stock, Decreased convergence rate between India and Eurasia at ~10 million years ago, in Proceedings of the 4th international symposium on "Geodynamics of Intracontinental Orogens and Geo-ecological Problems", Moscow-Bishkek, 4-10, 2009.

Lin, Yunung, K. Sieh and J. Stock, Submarine landslides along the Malacca Strait- Mergui Basin shelf margin: Insights from sequence-stratigraphic analysis, in press, Journal of Geophysical Research, V. 115, B12102, doi:10.1029/2009JB0087050, 2010.

Granot, R., S. C. Cande, J. M. Stock, F. J. Davey, and R. W. Clayton, Post-spreading rifting in the Adare Basin, Antarctica: Regional Tectonic Consequences, Geochemistry, Geophysics, Geosystems, 11, Q08005, 29 pp., doi:10.1029/2010GC003105,  2010.

Murphy, Janice, M. Goldman, G. Fuis, M. Rymer, R. Sickler, S. Miller, L. Butcher, J. Ricketts, C. Criley, J. Stock, J. Hole, and G. Chavez ,  Seismic Calibration Shots Conducted in 2009 in the Imperial Valley, Southern California, for the Salton Seismic Imaging Project (SSIP) , Open-File Report 2010–1295 , US Geological Survey, 2010.

Selvans, M., J. Stock, C. DeMets, O. Sanchez and B. Marquez-Azua, Constraints on Jalisco Block motion and tectonics of the Guadalajara Triple Junction from 1998-2001 campaign GPS data,  PAGEOPH, DOI  . 10.1007/s00024-010-0201-2, v. 168, p. 1435-1447, 2011.

Andrews, V., J. Stock, G. Reyes-Davila and C. A. Ramirez-Vazquez, Double-difference relocation of aftershocks of the Tecoman, Colima, Mexico earthquake of 23 January 2003, PAGEOPH, DOI 10.1007/s0024-010-023-0,  v. 168, p. 1331-1338, 2011.

Hauksson, E., J. Stock, L. K. Hutton, W. Yang, A. Vidal, and H. Kanamori, The 2010 Mw7.2 El Mayor-Cucapah earthquake sequence, Baja California, Mexico and southernmost California, USA: Active seismotectonics along the Mexican Pacific Margin,  PAGEOPH,   DOI 10.1007/s00024-010-0209-7, v. 168, p. 1255-1277, 2011.

Croon, M., S. C. Cande, and J. M. Stock, Abyssal hill deflections at Pacific-Antarctic ridge-transform intersections, doi:  10.1029/2010GC003236, Q11004, Geochemistry, Geophysics, Geosystems,  v. 11(11), 25 p., November 9,  2010.

Stock, J. M., Sismos en el Alto Golfo de California: tres ejemplos recientes, Nuestra Tierra, no. 15, p. 3-7, 2011.

Selvans, M.M., R. W. Clayton, J. M. Stock, and R. Granot, Using overlapping sonobuoy data from the Ross Sea to construct a 2D deep crustal velocity model, Marine Geophysical Research, DOI: 10.1007/s11001-011-9143-z, 2011.

Meng, L. J.-P. Ampuero, J. Stock, Z. Duputel, Y.Luo, and V.C. Tsai. Earthquake in a Maze Compressional Rupture Branching During the 2012 Mw 8.6 Sumatra Earthquake. Science (July 19). 1224030, 2012.

Duputel, Z. H. Kanamori, V.C. Tsai, L. Rivera, L. Meng, J.-P. Ampuero, and J. M. Stock.The 2012 Sumatra Great Earthquake Sequence. Earth and Planetary Science Letters 351-352, October 15: 247-257. doi:10.1016/j.epsl.2012.07.017, 2012.

R. Granot, S.C. Cande, J.M. Stock, and D. Damaske. Revised Eocene -Oligocene kinematics for the West Antarctic rift system. Geophysical Research Letters, vol. 40, 279-284, doi:10.1029/2012GL054181, 2013.

Hauksson, E., J. Stock, R. Bilham, M. Boese, X. Chen, E.J. Fielding, J. Galetska, K.W. Hudnut, K. Hutton, L.M. Jones, H. Kanamori, P.M. Shearer, J. Steidl, J. Treiman, S. Wei, and W. Yang. "Report on the August 2012 Brawley Earthquake Swarm in Imperial Valley, Southern California." Seismological Research Letters, vol. 84, no. 2, pp 177-189, Apr 2013.

J.R. Vidal-Solano, R. Lozano Santa Cruz, O. Zamora, A. Mendoza-Cordova, and J.M. Stock Geochemistry of the peralkaline pyroclastic flow deposit of NW Mexico, based on conventional and handheld X-ray fluorescence. Implications in a regional context. Journal of Iberian Geology, vol. 39 (1) 2013, pp 121-130

Olguín-Villa, A., E.,  J. R. Vidal-Solano and J. M. Stock, Petrografía, geoquímica, petro-fábrica y paleomagnetismo de la Toba de San Felipe en la región de Cataviña, Baja California, Mexico,  Revista Mexicana de Ciencias Geológicas, v.30 (2), 282-298,  2013.

Sengör, A.M. Celâl and Joann Stock The Ayyubid Orogen: An Ophiolite Obduction-Driven Orogen in the Late Cretaceous of the Neo-Tethyan South Margin. Geoscience Canada, v. 41,10.12789, geocanj.2014.41.042.

Schuler, J., D.J. Pugh, E.  Hauksson, R.S. White , J.M. Stock, and B. Brandsdottir, Focal mechanisms and size distribution of erthquakes beneath the Krafla central volcano, NE Iceland. Journal of Geophysical Research : Solid Earth, doi: 10.1002/2016JB013213, 2016.

Persaud, P., Y. Ma, J.M. Stock, John A. Hole, Gary S. Fuis and Liang Han, Fault zone characteristics and basin complexity in the southern Salton Trough, California, Geology, Geological Society og America, doi: 10.1030/G38033.1, July 2016.

Castro, R.R., Stock, J.M., Hauksson, E. and Clayton, R.W. Source Sunctions and path Effects from Earthquakes in the Farallon Transform Faukt Region, Gulf Of California, Mexico that occureed on October 2013, Pure Appl. Geophysics, v. 174, Number 6, 2239-2256, doi:10.1007/s00024-016-1346-4, 2017.